Genetic validation of historical plant pathology records – a case study based on the fungal genus Phoma from the ICMP culture collection
Data and Resources
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Supplementary Data Table 1XLSX
Details for each ICMP culture, its original determination and accepted name following this project, host, and Genbank numbers for each gene.
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Supplementary Data Table 2XLSX
Genbank numbers for the authentic isolates used for the identification of the ICMP cultures
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Supplementary Data Fig. 1PDF
Phylogeny of all ICMP cultures sequenced. Phylogeny based on ITS, LSU, Actin and beta-tubulin sequences for all ICMP cultures sequenced as part of this project.
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Supplementary Data Fig 2tif
Beta-tubulin alignment of representative Phoma macrostoma ICMP cultures, illustrating the three haplotypes within this species.
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Alignment for Fig 1nex
NEXUS file providing the alignment on which Fig 1 was based. Concatenated sequences, Actin, BTUB, ITS, LSU.
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fasta file with Alignment of ITS sequencesTXT
fasta file of ITS sequences for all Phoma and Phoma-like ICMP cultures
Additional Info
| Field | Value |
|---|---|
| Theme | |
| Author | |
| Maintainer | Peter Johnston |
| Maintainer Email | Peter Johnston |
| Source | |
| Source Created | Unknown |
| Source Modified | Unknown |
| Language | English |
| Spatial | |
| Source Identifier |