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Stented Coronary Artery Haemodynamics from Computational Fluid Dynamics...
New Zealand Universities FigshareComputational fluid dynamics (CFD) comparison between two common stent designs regarding hemodynamic optimisation and minimising adverse flow induced vessel wall stresses.Created 12 March 2019 • Updated 19 March 2019 -
Scaled-Up Coronary Flow Measurement using Phase-Contrast MRI
New Zealand Universities FigshareTrue-scale CFD compared to scale-up phantom phase contrast MRI for patient-specific coronary flowCreated 12 March 2019 • Updated 19 March 2019 -
Modellingnutrient uptake in the gut using CellML and ApiNATOMY
New Zealand Universities FigsharePoster presentation at the 10th CellML workshop in Auckland - New ZealandCreated 12 March 2019 • Updated 19 March 2019 -
Proposed submission and curation workflows for publishing discoverable,...
New Zealand Universities FigsharePoster presented at the 2016 VPH Conference.Created 12 March 2019 • Updated 19 March 2019 -
Exploiting Electronic Health Record Standard openEHR to Manage Experimental...
New Zealand Universities FigshareA presentation that I delivered at COMBINE 2016, mostly on behalf of Koray and Geoff.In computational physiology, standards to express mathematical and anatomically based geometric models rely heavily on the XML suite of standards and the Semantic Web. The Physiome Model Repository (PMR) provides an infrastructure to manage models and personal workspaces...Created 12 March 2019 • Updated 19 March 2019 -
A new method to quantify boundary conditions using dynamically scaled in...
New Zealand Universities FigshareUsing dynamic similarity to scale-up coronary phantoms for phase contrast MRI flow assessment to overcome spatio-temporal limitationsCreated 12 March 2019 • Updated 19 March 2019 -
Exploiting Electronic Health Record Standard openEHR to Manage Experimental...
New Zealand Universities FigshareA presentation that I delivered at the 2016 VPH Conference, on behalf of Koray and Geoff.In computational physiology, standards to express mathematical and anatomically based geometric models rely heavily on the XML suite of standards and the Semantic Web. The Physiome Model Repository (PMR) provides an infrastructure to manage models and personal...Created 12 March 2019 • Updated 19 March 2019 -
Osmium: helping PMR support the VPH requirements for identifiable and...
New Zealand Universities FigsharePresentation delivered at the 2016 VPH Conference, providing a historical view of how the Physiome Model Repository has evolved over the years. Leading to the current Osmium project.Created 12 March 2019 • Updated 19 March 2019 -
Discoverable, reproducible, and reusable cardiac models
New Zealand Universities FigshareTalk I presented at the 16th International Conference on Biomedical Engineering. Submitted abstract: Computational models of the heart have evolved substantially since Denis Noble published his original 1962 modification of the Hodgkin & Huxley equations applicable to Purkinje fibre action and pacemaker potentials. As available computational power has...Created 12 March 2019 • Updated 19 March 2019 -
Discoverable, Reproducible, and Reusable Biosimulation Models
New Zealand Universities FigsharePoster presented at Experimental Biology 2017, Chicago, IL, USA.Created 12 March 2019 • Updated 19 March 2019 -
Linking Computational Physiology Models with Clinical Data
New Zealand Universities FigshareLinking Computational Physiology Models with Clinical Data can be instrumental for real-world model validation as well as enable personalised and predictive clinical decision support systems. Electronic health records (EHR) are sinks of biomedical knowledge and include manifestations of genomic and environmental aspects that impact on biological systems....Created 12 March 2019 • Updated 19 March 2019 -
DTP CompPhys
New Zealand Universities FigshareThis presentation is part of the DTP program.Created 12 March 2019 • Updated 19 March 2019 -
ABI_PH_Models.pptx
New Zealand Universities FigsharePresentation regarding Auckland Bioengineering progress toward subject specific modelling of pulmonary hypertensionCreated 12 March 2019 • Updated 19 March 2019 -
Intro to Physiome Project, Units and Bond Graphs.pdf
New Zealand Universities FigshareThe slides from Peter Hunter's talk during the March 2018 Computational Physiology module of the MedTech CoRE's Doctoral Training Programme.Created 12 March 2019 • Updated 19 March 2019 -
Model semantics for discovery, composition, and personalisation
New Zealand Universities FigsharePresentation delivered at the World Congress of Biomechanics 2018, in the "VPH Institute session: 25 years of the Physiome".Created 12 March 2019 • Updated 19 March 2019 -
Center for Reproducible Biomedical Modeling
New Zealand Universities FigsharePoster presented at the 40th IEEE Engineering in Medicine and Biology Conference, July 2018, Honolulu. Introduces the newly funded Center for Reproducible Biomedical Modeling.Created 12 March 2019 • Updated 19 March 2019 -
University of Auckland Diabetic Retinopathy (UoA-DR) Database- END USER...
New Zealand Universities FigshareINTRODUCTIONThe University of Auckland Retinopathy Database has been created as part of the research carried out at the University of Auckland aimed at developing an automatic screening system to screen patients affected by diabetic retinopathy. The Database has been developed in collaboration with the Al-Salama Eye Hospital and collaborators from...Created 12 March 2019 • Updated 19 March 2019 -
Physiome: encouraging reproducibly FAIR computational modelling
New Zealand Universities FigshareSlides from the presentation I delivered at the 2018 VPH Conference, Zaragoza, Spain.Created 12 March 2019 • Updated 19 March 2019 -
Semantics-based model discovery and assembly for renal transport
New Zealand Universities FigsharePresentation I presented on behalf of Dewan at the COMBINE 2018 meeting in Boston, October 2018.Abstract:Biophysically-based computational models have great potential to make significant contributions to many clinical applications. To help realise this potential, we have been developing tools to help scientists and clinicians discover existing models that...Created 12 March 2019 • Updated 19 March 2019 -
Semantics-based model discovery for renal transport
New Zealand Universities FigsharePresentation I delivered at the VPH 2018 conference, on behalf of Dewan.Created 12 March 2019 • Updated 19 March 2019