data test

My CellML presentation from the 2012 COMBINE meeting.

My presentation on the usage of embedded workspaces in the Physiome Model Repository given at the 7th International CellML Workshop. Embedded workspaces are implemented as mercurial subrepositories.

My presentation on the CellML community, delivered at the 7th International CellML Workshop.

My SED-ML talk from the 7th International CellML Workshop, giving a brief overview of the current L1V1 specification and then going over the main changes to be introduced in SED-ML L1V2. The slides I presented are mostly borrowed from previous presentations by Dagmar Waltemath and Frank Bergmann.

The slides from the Physiome Model Repository tutorial I gave at the 2013 Hackathon on Resources for Modeling in Biology (HARMONY).

My presentation on CellML from the COMBINE 2013 meeting, 17 September 2013, Paris.

Presentation I gave at the ICBME conference held 3-7 December 2013 in Singapore.

A presentation I gave 28 February 2014 at the 25th New Zealand Nephrology Conference, Auckland, New Zealand. The slides were accompanied by a software demonstration, the software will shortly be available online via the GET project on BitBucket and readthedocs.

The presentation I gave at the 8th International CellML Workshop introducing my suite of tools for modelling epoithelial transport using CellML.

Brief overview of the support for CellML in the OpenCMISS environment.

A presentation I gave at the 8th International CellML Workshop describing some current examples of modularity and reuse, some thoughts on version control and provenance for CellML models, and the use of embedded workspaces in the physiome model repository.

Welcome slides from the start of day 2 at the 8th International CellML Workshop, includes the introduction of nominees standing for election as CellML editors.

Welcome and overview of the first day of the 8th International CellML Workshop.

My "introduction to SED-ML" presentation from the 8th International CellML Workshop.

Slides from my presentation at the COMBINE/ERASysAPP tutorial at the ICSB 2014 meeting, 14 September 2014, in Melbourne, Australia. This presentation provides a very brief introduction to CellML, the software powering the physiome repository (PMR2), and the software tool OpenCOR.

Slides from my presentation on modularity and reuse at the "NORMSYS/ISBE Workshop: standards for data and model exchange in systems biology". Showing how the modularity and reuse aspects of CellML work with the physiome repository to enusre accurate provenance records and reproducible simulations across a distributed network of scientists.

Presentation I gave at the Auckland Bioengineering Institute's Friday Forum on 26th of September 2014. Described a bit of background as to why modularity and reuse is important in modelling of biological systems and how CellML provides facilities to enable modellers to make use of modularity and reuse in their model descriptions. Also talked about how the...

Presentation I gave at the VPH-Share General Assembly 2015, Krakow, Poland. Wednesday, 29 April 2015.

Slides for a talk given on October the 5th, 2015, as part of the COMPASS Spring Seminar Series 2015 by Prof Mark Gahegan from the Centre for eResearch Abstract: Researchers need a variety of data services to support their work, from archives, to backups, through to data sharing and eventually data publishing. And it is very clear that our funding agencies...

Part 1 of 2 presentations to ACRSS on RDM service development at the University of Auckland.